Showing posts with label biomarkers. Show all posts
Showing posts with label biomarkers. Show all posts

Friday, June 8, 2018

OT- LUNA Blog-Luna’s NanoSPRi-Based Assay Rapidly Detects Organ Injury Biomarkers with a Blood Test



by Judy M. Obliosca, Dimpal Patel, Yang Xu, Christopher Tison
Rapid and Sensitive Detection of Organ Injuries Could Save Lives
Major organ injuries such as those to the liver, lung, kidney and brain can lead to high mortality in critically ill patients. Since these injuries are internal and frequently do not present for easy identification, their misdiagnosis can be deadly. Advanced noninvasive testing with low level detection (high sensitivity) and the ability to identify the exact problem (high specificity) is therefore needed to enhance detection, particularly at early stages. Biomarkers may have predictive values before tissue injury for specific organs becomes irreversible. Identification of such biomarkers in clinical samples would improve the early detection of organ injury, help identify appropriate preventive or curative strategies, prevent organ injury from proceeding to organ failure, and improve quality of life. So far, detection of these biomarkers relies on expensive and time consuming methods such as polymerase chain reaction, mass spectrometry, bead- and absorption-based assays and enzyme-linked immunosorbent assay (ELISA). Even with their drawbacks, they still don’t have the specificity and sensitivity desired, and are limited to looking for one biomarker at a time.
The nanoSPRi Technology Fills a Critical Market Need
Luna has developed a sensing chip that monitors biomolecular interactions on its surface.  Technically, it’s an in vitro diagnostic assay based on a nano-enhanced surface plasmon resonance imaging (nanoSPRi) technique. Luna’s assay immobilizes diverse capture points of antibodies and aptamers onto designated regions of the chip.  When the sample of human serum is flowed across the chip, specific proteins and nucleic acids (DNA/RNA) are simultaneously trapped by their respective capture agents on the chip.  This binding enables a portable, benchtop SPRi instrument equipped with a highly sensitive CCD camera to capture changes in the reflectivity on the chip in real-time. The results from the detection are displayed as a “sensorgram” (binding response on the y-axis plotted against time on the x-axis). From studying the shape of the produced sensorgram, capabilities of the technique such as binding, specificity, affinity, kinetics, active binding concentration and limit of detection were determined.

Luna’s nanoSPRi-based assay is designed for rapid, highly sensitive and specific detection of protein and nucleic acid (DNA/RNA) organ injury biomarkers in human serum in less than an hour of assay analysis time. Activated sensing chip is both functionalized and blocked using Luna’s blocking system.

Luna’s nanoSPRi-based assay is designed for rapid, highly sensitive, and simultaneous detection of protein, DNA, and microRNA biomarkers in human serum in less than an hour of analysis. Luna’s assay consists of 3 major features: (1) The novel sensing chip surface functionalization and blocking system that can almost eliminate (>95%) non-specific binding events from human serum. (2) The array technology that enables multiplexed detection of a panel of biomarkers (both protein- and nucleic acid-based) for diverse types of organ (lung, liver, brain) injuries. (3) The nanoenhancer quantum dots (QD) that enable ultrasensitive biomarker detection at very low concentration (pg/mL). Combined, these features result in a highly sensitive, rapid, and multiplexed.




Successful detection of human interleukin 4 (IL4) biomarker in human serum using Luna’s nanoSPRi platform. (A) 10 ng/mL IL4 in 10% and (B) 100% human serum. (C) Detection of IL4 in 10% serum shows very high sensitivity with limit of detection at 0.1 pg/mL. (D) Simultaneous detection of 3 biomarkers (MIP3, IL4 and MIP1b, 5 ng/mL each) in 10% human serum.

Proprietary Modifications to the Sensor Have Resulted in Significant Advances in Biomarker Analysis
Luna has successfully developed a novel functionalization and blocking system on the sensing chip surface for use with human serum-based samples, and eliminated >95% of non-specific binding of unwanted constituents. By using the activated sensing chip, the inflammatory biomarker human interleukin 4 (IL-4) was successfully detected in less than an hour for both dilute (10%) and whole (100%) human serum samples. The assay achieved a 0.1 pg/mL IL4 limit of detection, which is 2 orders of magnitude better than that obtained using a typical ELISA. Luna also successfully achieved simultaneous detection of 6 inflammatory and acute lung injury biomarkers (IL4, MIP3, MIP1b, TNF-α, IL1β and IL8), 2 nucleic acid-based liver injury biomarkers (the DNA counterpart of miR122 and the human angiopoietin-like 3) and 1 traumatic brain injury biomarker (eotaxin CCL11) in 10% human serum with great sensitivity, selectivity and high S/N ratio. Moreover, Luna successfully integrated protein and DNA/RNA biomarker detections in serum on a single sensing chip with minimal cross-reactivity issue.
Luna’s nanoSPRi Assay is Posed to Revolutionize Advanced Biomarker Detection in Multiple Fields
Overall, Luna’s superior results demonstrate that the assay is a promising platform for accurate early diagnosis of multiple organ injuries. To date, this has been demonstrated with high sensitivity detection of biomarkers indicated in lung, liver, and kidney injuries. Further, our recently successful detection of the brain injury biomarker eotaxin CCL11 demonstrates capability for use in military and sports head trauma injury analysis. For example, CCL11 was recently shown to be predictive of chronic traumatic encephalopathy, or CTE, and has become a critical focus in brain injuries to professional athletes. This diagnostic capability being developed by Luna is a platform technology, and upon successful implementation for organ injuries, could be reconfigured for the study of a wide variety of diseases in various body fluids.
This work was supported by the US Army Medical Research Acquisition Activity (USAMRAA) under Contract No. W81XWH-14-C-0146. The views, opinions, and findings contained are those of the author(s) and should not be construed as official USAMRAA position, policy, or decision unless designated by other documentation.

Monday, July 10, 2017

SBIR-STTR Phase II award-Advratech DOD-Terahertz Spectroscopic Chemical Sensor for Analysis of Fatigued Human Breath





 Ivan Medvedev, Ph.D.
 (937) 775-2561
 ivan.medvedev@wright.edu

https://www.sbir.gov/sbirsearch/detail/1159801

Sleep deprivation, exercise, or continuous mental tasking are fatigue-related contributors in DoD mishaps. Therefore, a critical need exists for fatigue detection technologies which are real-time, non-invasive, compact, portable, and accurate to aid decisions to replace or rest an individual as a preventative measure. Certain compounds in human breath have been linked to disease states, and it is anticipated that fatigue affects breath composition similarly. Our approach utilizes THz spectroscopy which is capable of detecting and measuring numerous breath biomarkers with absolute specificity, high sensitivity, and high throughput. In Phase I, the THz spectroscopy detection method was validated against GC/MS methods and identified breath compounds isoprene, dimethyl sulfide, and acetaldehyde in sleep-deprived individuals that correlate well with results from cognitive tests measuring fatigue. In Phase II, we will extend GC/MS and THz spectroscopy analysis in sleep-deprived subjects to acquire data for algorithm development to validate predictive capabilities of breath biomarker analysis for fatigue. We will also build and validate a compact, portable, integrated table top THz chemical sensor capable of monitoring breath compounds in real-time. Advratech is poised to collaborate with Boeing, WPAFB (Human Systems Division and AFRL/711th HPW) and TITUS during Phase II to accelerate commercialization of the proposed technology.; BENEFIT: The field of breath biomarkers is relatively unexplored compared to tests and diagnostics based on blood, urine, or other bodily parameters (i.e., EKG). The benefits and potential commercial applications of THz sensor technology address both issues of breath diagnostics and the detection of a wide array of compounds. THz spectroscopic sensors are unique in their ability to achieve high sensitivity and near absolute specificity and are amenable to miniaturization, portability, and high-throughput. We will refine our algorithms in Phase II for the putative biomarkers to develop a predictive capability of when an individual may be fatigued and a drop in performance may occur. This non-invasive approach to detect fatigue will benefit DoD and commercial industries in which fatigue has contributed to accidents, i.e., commercial pilots and drivers. Athletes and Special Operations Forces, who engage in strenuous training and sometimes irregular sleep, will also benefit from early fatigue warnings before conditions such as rhabdomyolysis develop. Lastly, THz spectroscopy is ideal for environmental monitoring in the field as this technique can detect most light compounds with electric dipole moments. Thus, with spectroscopic library, hardware and software development, THz sensors can be utilized in a variety of health, human performance, and environmental settings.